404 after manually updating

Hello, First of all I wanted to do the updated wordpress 4.1 to 4.1.1 automatically (as usual) but I had failed at every attempt (100% sure that it comes from my host)
So I decided to do it manually, obviously no problem except that since I can not edit my articles and pages in the admin panel when I click on edit an article that reference me to a page with the following message: Error 404 – No file found.

For more information:
I’m in permalinks
and I added that in my .htaccess (long before the problem)

<Files .htaccess>
order allow,deny
deny from all
</Files>
# BEGIN WordPress
<IfModule mod_rewrite.c>
RewriteEngine On
RewriteBase /
RewriteRule ^index\.php$ - [L]
RewriteCond %{REQUEST_FILENAME} !-f
RewriteCond %{REQUEST_FILENAME} !-d
RewriteRule . /index.php [L]
</IfModule>

# END WordPress

Solution ever try:
delete my .htaccess
deactivate my theme and set a default.
disable my plugins

WP my current configuration:

– WordPress Version: 4.1.1
– PHP Version / MySQL: 5.5.12-2ubuntu4.2 /
– Theme used: basketball scoreboard and shoe spj004
– Extensions up: Akismet (3.0.4), Daily Cleaner & amp; Optimizer Lite (1.2) How Disqus System (2.84), Event Organiser (2.12.1), Facebook Like Box (2.7) Forum_wordpress_fr (3.9), Jetpack by WordPress.com (3.3.2) LeagueManager (3.9.1.1) , Manage BasketClub (1.2) MPRESS Image Refresh (0.3), WordPress SEO (1.7.3.3), WP-Memory-Usage (1.2.2), YOP Poll (5.6)
– Site address: https://bcroezeen.olympe.in
– Host Name: Apache

PS : sorry for my bad english