[Plugin: TinyMCE Advanced] Breaks some Admin Functionality

Hello. I really love this plug-in but for some reason when it is activated, it breaks some of my WordPress Admin functionality. Here is a list of what I see is broken:

– The ability to click on a sidebar menu item and see the submenu’s drop down (you have to click the menu item and the page refreshes to see the expanded menu)

– the ability to click on the quick-edit or any of those links in the page/post view (you have to click on the title to go to the page)

– when installing plug-ins the installer page doesnt come up in the lightbox, it fills the screen.

If anyone knows why this is happening or what I can do to fix it, the help would be much appreciated. (anyone else have this issue?) Thanks!