Hi @compumec, thanks for your question.
I have seen templates that pre-date newer plugin features reporting “Local Changes” when there are seemingly none when manually checking. I was wondering if you’re seeing this reported in Central too, or are the templates claiming to be OK, but you’re just not seeing the settings reflected on the sites?
The solution to the above was to duplicate the existing template, then move your sites over to the new version of that template and re-sync. Can you let me know if that has any effect or produces exactly the same results? Also let me know if you’re running a mixture of Free and Premium sites.
Thanks,
Peter.