I’d like to add that I have the soaksoak.ru on a site and also found several files in the site root and includes folder that have been affected. I wish I noted the file names before posting here, but the modified dates seem to correspond with the same edit date as the template-loader.php
and swfobject.js files. Also Avast identified these files as containing malware references.
Can someone check their site root for these file names?