@fhaps Sorry for the late reply/update, but just want to give a heads up to how everything has been since the last post.
So I’ve done as fhaps advised and it seems to have helped to diagnose the issue. It turned out to be two conflicting plugins which I’ve deleted and installed a new plugin. I haven’t had an alignment issue since however, it did affect my Swatches. It no longer works, as to every time I select a different variant, the product never changes. IF there’s a solution for this that would be great. I’ve been so busy lately I’ve decided to just disable the swatch variant plugin until I can find a solution.
Thank you @fhaps. I hope others who have similar issue can find this post helpful.
P.S. If anyone has a solution to the variant swatch issue I would love to hear your thoughts. I’ll update this post if and when I do find a solution myself.